Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | APR52_18670 | Q8K370 | Negative | 4041662 - 4042870 | 43025.7 |
| 2-deoxy-d-gluconate 3-dehydrogenase | APR52_18675 | P50199 | Negative | 4042884 - 4043630 | 26076.6 |
| glutathione s-transferase | APR52_18680 | A0A6J4B5J2 | Negative | 4043634 - 4044269 | 23993.4 |
| hypothetical protein | APR52_18685 | P96676 | Negative | 4044322 - 4044942 | 23024.7 |
| hypothetical protein | APR52_18690 | Not Available | Negative | 4045002 - 4045766 | 27147.4 |
| 3-keto-5-aminohexanoate cleavage protein | APR52_18695 | Not Available | Negative | 4045786 - 4046724 | 33948.5 |
| hypothetical protein | APR52_18700 | Not Available | Negative | 4046773 - 4047402 | 22231.9 |
| abc transporter permease | APR52_18705 | Not Available | Negative | 4047446 - 4048195 | 26446.4 |
| hypothetical protein | APR52_18710 | Not Available | Negative | 4048192 - 4048962 | 26578.7 |
| abc transporter | APR52_18715 | Q2YJB5 | Negative | 4048959 - 4049744 | 28488.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
