Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | APR52_18610 | Not Available | Positive | 4028257 - 4028943 | 25565.2 |
| molybdenum abc transporter substrate-binding protein | APR52_18620 | A0A0A1H8I4 | Positive | 4030477 - 4031301 | 28492.4 |
| lysr family transcriptional regulator | APR52_18625 | Not Available | Negative | 4031315 - 4032241 | 33631.8 |
| enamine deaminase rida | APR52_18630 | Not Available | Positive | 4032358 - 4032768 | 14692.4 |
| lysine transporter lyse | APR52_18635 | Not Available | Negative | 4032773 - 4033414 | 22992.5 |
| two-component system sensor histidine kinase/response regulator | APR52_18640 | Not Available | Negative | 4033476 - 4035995 | 91269.6 |
| two-component system response regulator | APR52_18645 | G7WMP8 | Negative | 4035988 - 4036446 | 16755.3 |
| histidine kinase | APR52_18650 | Q9R6X3 | Negative | 4036439 - 4038694 | 81169.1 |
| acetyl-coa acetyltransferase | APR52_18660 | Not Available | Negative | 4039378 - 4040568 | 41451.9 |
| aminoglycoside phosphotransferase | APR52_18665 | Q6JQN1 | Negative | 4040607 - 4041665 | 39799.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
