Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR52_18560 | P52670 | Negative | 4018308 - 4019213 | 32465.6 |
| hypothetical protein | APR52_18565 | Not Available | Positive | 4019322 - 4020230 | 34659.1 |
| enamine deaminase rida | APR52_18570 | Not Available | Positive | 4020230 - 4020631 | 13929.7 |
| lipase | APR52_18575 | Not Available | Positive | 4020639 - 4021541 | 32364.6 |
| hypothetical protein | APR52_18580 | Not Available | Positive | 4021654 - 4022070 | 14342.3 |
| hypothetical protein | APR52_18585 | Not Available | Negative | 4022096 - 4022512 | 15265.4 |
| peptidase m1 | APR52_18590 | P55786 | Negative | 4022574 - 4024796 | 81399.0 |
| nad-dependent protein deacetylase | APR52_18595 | Not Available | Positive | 4025719 - 4026435 | 26038.8 |
| hypothetical protein | APR52_18600 | Q8IV48 | Positive | 4026555 - 4027088 | 20218.0 |
| hypothetical protein | APR52_18605 | Not Available | Negative | 4027163 - 4028056 | 32326.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
