Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | APR52_18405 | Not Available | Positive | 3980775 - 3981749 | 33936.2 |
| beta-glucosidase | APR52_18410 | Q56078 | Positive | 3981847 - 3984123 | 80511.6 |
| hypothetical protein | APR52_18415 | Not Available | Negative | 3984137 - 3984586 | 16855.7 |
| hypothetical protein | APR52_18420 | K7ZP88 | Negative | 3984664 - 3986703 | 65185.0 |
| phospholipase c, phosphocholine-specific | APR52_18425 | Not Available | Negative | 3986735 - 3988990 | 81803.0 |
| phosphonate abc transporter permease | APR52_18430 | Not Available | Negative | 3989391 - 3990422 | 37710.4 |
| phosphonate abc transporter | APR52_18435 | Q31DV4 | Negative | 3990419 - 3991213 | 28062.1 |
| phosphonate abc transporter substrate-binding protein | APR52_18440 | Not Available | Negative | 3991288 - 3992223 | 32727.4 |
| hypothetical protein | APR52_18445 | Q8CPW3 | Positive | 3992417 - 3993271 | 29576.1 |
| transcriptional regulator | APR52_18450 | Q97MK5 | Negative | 3993258 - 3994091 | 30173.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
