Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c5 | APR52_01175 | Not Available | Negative | 250354 - 250881 | 19344.7 |
| hypothetical protein | APR52_01180 | Not Available | Negative | 251097 - 251423 | 11232.4 |
| oxidoreductase | APR52_01185 | P25906 | Negative | 252091 - 252969 | 30972.3 |
| lysr family transcriptional regulator | APR52_01190 | Not Available | Positive | 253078 - 253980 | 32488.3 |
| asnc family transcriptional regulator | APR52_01195 | P42179 | Negative | 253990 - 254448 | 16627.3 |
| tryptophanase | APR52_01200 | Q7NYV9 | Positive | 254722 - 256113 | 51043.9 |
| methionine aminopeptidase | APR52_01205 | Not Available | Negative | 256110 - 256904 | 28890.8 |
| hypothetical protein | APR52_01210 | Not Available | Negative | 256901 - 257179 | 9918.17 |
| succinate-semialdehyde dehydrogenase | APR52_01215 | Not Available | Negative | 257256 - 258722 | 51805.4 |
| 4-aminobutyrate aminotransferase | APR52_01220 | P50457 | Negative | 258719 - 259987 | 44297.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
