Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_18305 | Q9HTH5 | Negative | 3961196 - 3961807 | 21975.8 |
| ferredoxin | APR52_18310 | P0CY91 | Negative | 3961845 - 3962171 | 11750.0 |
| mfs transporter | APR52_18315 | Not Available | Negative | 3962182 - 3963510 | 47579.0 |
| voltage-gated chloride channel protein | APR52_18320 | Q87WD2 | Positive | 3963951 - 3965207 | 44510.2 |
| lysr family transcriptional regulator | APR52_18325 | P0DUU5 | Negative | 3965220 - 3966098 | 32348.7 |
| hypothetical protein | APR52_18330 | Not Available | Positive | 3966245 - 3966775 | 19050.9 |
| mfs transporter | APR52_18335 | D0ZXQ3 | Positive | 3966779 - 3968284 | 51213.1 |
| hydrolase | APR52_18340 | Not Available | Negative | 3968294 - 3968980 | 24051.8 |
| crp/fnr family transcriptional regulator | APR52_18345 | Q5SID7 | Negative | 3969080 - 3969799 | 25817.7 |
| phosphohydrolase | APR52_18350 | Not Available | Positive | 3969974 - 3970564 | 22496.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
