Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | APR52_18205 | Q9JXZ2 | Negative | 3941470 - 3944988 | 130062.0 |
| hypothetical protein | APR52_18210 | C5CPZ9 | Positive | 3945118 - 3945912 | 29103.9 |
| two-component system response regulator | APR52_18215 | Not Available | Positive | 3945928 - 3946635 | 25564.9 |
| histidine kinase | APR52_18220 | Not Available | Positive | 3946595 - 3948154 | 56088.9 |
| tripartite tricarboxylate transporter tctb | APR52_18225 | Not Available | Positive | 3948343 - 3948777 | 15112.0 |
| hypothetical protein | APR52_18230 | Not Available | Positive | 3948782 - 3950341 | 54889.8 |
| hypothetical protein | APR52_18235 | Not Available | Negative | 3950344 - 3950757 | 15396.7 |
| gnat family acetyltransferase | APR52_18240 | Not Available | Positive | 3950900 - 3951367 | 16879.3 |
| pirin | APR52_18245 | P58114 | Negative | 3951371 - 3952300 | 33105.6 |
| nadph-dependent fmn reductase | APR52_18250 | A0A0H2ZDT7 | Negative | 3952353 - 3952904 | 19367.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
