Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitermination protein nusb | APR52_18155 | C5CPZ2 | Positive | 3927577 - 3928146 | 20662.4 |
| aminotransferase | APR52_18160 | P96847 | Positive | 3928190 - 3929374 | 43145.4 |
| 4-hydroxybenzoyl-coa thioesterase | APR52_18165 | P44679 | Positive | 3930033 - 3930482 | 16861.3 |
| protein tolq | APR52_18170 | P50598 | Positive | 3930479 - 3931198 | 25943.4 |
| protein tolr | APR52_18175 | Q05606 | Positive | 3931215 - 3931652 | 15636.2 |
| protein tola | APR52_18180 | Not Available | Positive | 3931675 - 3932583 | 33472.5 |
| cell division protein | APR52_18185 | P08149 | Positive | 3932735 - 3934465 | 62845.3 |
| hypothetical protein | APR52_18190 | Not Available | Positive | 3934533 - 3935759 | 43663.0 |
| dna helicase | APR52_18195 | P47386 | Positive | 3935756 - 3940975 | 191760.0 |
| hypothetical protein | APR52_18200 | Not Available | Negative | 3940950 - 3941306 | 12826.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
