Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_18105 | Not Available | Negative | 3917066 - 3917596 | 18280.3 |
| hypothetical protein | APR52_18110 | Not Available | Negative | 3917593 - 3917964 | 13683.1 |
| hypothetical protein | APR52_18115 | Q87E25 | Negative | 3918018 - 3921590 | 126320.0 |
| hypothetical protein | APR52_18120 | Not Available | Negative | 3921703 - 3922353 | 22234.6 |
| hypothetical protein | APR52_18125 | Not Available | Negative | 3922350 - 3923264 | 32397.1 |
| hypothetical protein | APR52_18130 | Not Available | Negative | 3923257 - 3923814 | 19126.9 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | APR52_18135 | P25539 | Positive | 3924021 - 3925148 | 39090.1 |
| riboflavin synthase subunit alpha | APR52_18140 | P50854 | Positive | 3925259 - 3925906 | 22464.7 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | APR52_18145 | Q9JZ77 | Positive | 3925944 - 3927098 | 40887.3 |
| 6,7-dimethyl-8-ribityllumazine synthase | APR52_18150 | A1TPC1 | Positive | 3927104 - 3927580 | 16500.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
