Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR52_17955 | Not Available | Positive | 3880300 - 3880743 | 16387.7 |
| formyl-coenzyme a transferase | APR52_17960 | A5EGD7 | Positive | 3880740 - 3881987 | 45318.4 |
| hypothetical protein | APR52_17965 | Not Available | Positive | 3882240 - 3882572 | 12887.0 |
| succinyl-coa synthetase subunit beta | APR52_17970 | A4G230 | Positive | 3882608 - 3883786 | 42038.7 |
| succinate--coa ligase | APR52_17975 | Not Available | Positive | 3883927 - 3884826 | 31608.7 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | APR52_17980 | I6Y276 | Positive | 3884888 - 3885655 | 27733.3 |
| 2-dehydropantoate 2-reductase | APR52_17985 | Not Available | Positive | 3885686 - 3886696 | 36126.9 |
| pyruvate kinase | APR52_17990 | O05118 | Positive | 3886710 - 3888134 | 51195.9 |
| transcriptional regulator | APR52_17995 | Not Available | Positive | 3888223 - 3889152 | 34144.6 |
| oxalate/formate mfs antiporter | APR52_18000 | Not Available | Positive | 3889887 - 3891215 | 47545.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
