Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-nitropropane dioxygenase | APR52_17905 | O06179 | Positive | 3870398 - 3871510 | 39520.5 |
| Trna-arg | Not Available | Not Available | Positive | 3871592 - 3871666 | Not Available |
| hypothetical protein | APR52_17915 | Not Available | Negative | 3871725 - 3871928 | 7625.45 |
| tricarboxylate transporter | APR52_17920 | Not Available | Positive | 3872252 - 3873268 | 36382.4 |
| tripartite tricarboxylate transporter tctb | APR52_17925 | Not Available | Positive | 3873398 - 3873922 | 18894.5 |
| tricarboxylate transporter | APR52_17930 | Not Available | Positive | 3873945 - 3875474 | 53822.8 |
| transporter | APR52_17935 | Not Available | Positive | 3875491 - 3876327 | 30412.7 |
| cyclic nucleotide-binding protein | APR52_17940 | Not Available | Negative | 3876334 - 3876942 | 23204.4 |
| oxalyl-coa decarboxylase | APR52_17945 | P40149 | Positive | 3877099 - 3878937 | 64566.9 |
| formyl-coenzyme a transferase | APR52_17950 | A7ZPI2 | Positive | 3878963 - 3880216 | 45675.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
