Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethyl tert-butyl ether degradation protein ethd | APR52_17855 | Not Available | Positive | 3859486 - 3860190 | 26307.1 |
| hypothetical protein | APR52_17860 | Not Available | Positive | 3860324 - 3861142 | 29632.5 |
| hypothetical protein | APR52_17865 | Not Available | Negative | 3861123 - 3862256 | 41983.3 |
| hypothetical protein | APR52_17870 | Not Available | Negative | 3862474 - 3863607 | 39578.6 |
| quinone oxidoreductase | APR52_17875 | Not Available | Negative | 3863620 - 3864624 | 35247.7 |
| acyl-coa dehydrogenase | APR52_17880 | Not Available | Positive | 3864746 - 3865978 | 44624.3 |
| acyl-coa transferase | APR52_17885 | Not Available | Negative | 3865983 - 3867209 | 44114.8 |
| iclr family transcriptional regulator | APR52_17890 | P42968 | Positive | 3867376 - 3868185 | 29734.2 |
| acyl-coa dehydrogenase | APR52_17895 | G3KIM8 | Positive | 3868210 - 3869370 | 41900.3 |
| abc transporter substrate-binding protein | APR52_17900 | Not Available | Positive | 3869421 - 3870401 | 33988.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
