Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | APR52_01120 | Not Available | Negative | 238782 - 239189 | 14791.5 |
| arac family transcriptional regulator | APR52_01125 | Not Available | Negative | 239186 - 239698 | 18603.0 |
| oxidoreductase | APR52_01130 | O31767 | Negative | 239695 - 240441 | 25320.4 |
| hypothetical protein | APR52_01135 | Not Available | Negative | 240527 - 241201 | 23347.0 |
| proteophosphoglycan ppg4 | APR52_01140 | Not Available | Negative | 241218 - 241508 | 9399.93 |
| aldehyde dehydrogenase | APR52_01145 | S0ENH1 | Negative | 241690 - 243135 | 51157.4 |
| alcohol dehydrogenase | APR52_01150 | Q4W6G0 | Positive | 243363 - 245510 | 77341.4 |
| hypothetical protein | APR52_01155 | Not Available | Positive | 245586 - 246416 | 30727.8 |
| hypothetical protein | APR52_01160 | Not Available | Positive | 246805 - 247215 | 15040.7 |
| transposase | APR52_01170 | Not Available | Negative | 249828 - 249950 | 4497.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
