Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | APR52_17805 | Not Available | Negative | 3848023 - 3848829 | 28720.1 |
| 3-oxosteroid 1-dehydrogenase | APR52_17810 | Not Available | Positive | 3849015 - 3850772 | 62235.9 |
| 3-oxoacyl-acp reductase | APR52_17815 | Not Available | Positive | 3850820 - 3851596 | 26782.4 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_17820 | Q2YK58 | Positive | 3851649 - 3852848 | 42722.5 |
| abc transporter permease | APR52_17825 | Q58665 | Positive | 3852918 - 3853841 | 31614.9 |
| abc transporter atp-binding protein | APR52_17830 | Not Available | Positive | 3853838 - 3855634 | 63459.4 |
| abc transporter atp-binding protein | APR52_17835 | Not Available | Positive | 3855655 - 3856365 | 25463.2 |
| mbl fold metallo-hydrolase | APR52_17840 | Not Available | Positive | 3856398 - 3857375 | 36265.1 |
| hypothetical protein | APR52_17845 | P37511 | Positive | 3857419 - 3858297 | 30412.3 |
| nadh:flavin oxidoreductase / nadh oxidase | APR52_17850 | Not Available | Positive | 3858305 - 3859489 | 41923.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
