Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chea | APR52_17755 | P18769 | Positive | 3834187 - 3840318 | 218953.0 |
| deoxyribodipyrimidine photolyase | APR52_17760 | Q9KNA8 | Negative | 3840388 - 3841890 | 56198.9 |
| hypothetical protein | APR52_17765 | C5CL71 | Positive | 3841891 - 3842490 | 21615.8 |
| holliday junction resolvase | APR52_17770 | Q12EE8 | Positive | 3842502 - 3842936 | 15727.5 |
| uracil phosphoribosyltransferase | APR52_17775 | Q8Y1L3 | Positive | 3842933 - 3843439 | 17699.2 |
| aspartate carbamoyltransferase catalytic subunit | APR52_17780 | C5CL68 | Positive | 3843443 - 3844405 | 34825.4 |
| dihydroorotase | APR52_17785 | Q51551 | Positive | 3844402 - 3845685 | 44206.3 |
| glycerol acyltransferase | APR52_17790 | Q59601 | Positive | 3845739 - 3846485 | 27671.3 |
| hypothetical protein | APR52_17795 | Not Available | Negative | 3846498 - 3847418 | 33281.2 |
| hypothetical protein | APR52_17800 | Not Available | Positive | 3847419 - 3847664 | 8618.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
