Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_17705 | Not Available | Negative | 3823696 - 3824199 | 19033.8 |
| lysr family transcriptional regulator | APR52_17710 | Not Available | Negative | 3824351 - 3825247 | 32821.5 |
| abc transporter substrate-binding protein | APR52_17715 | Not Available | Positive | 3825417 - 3826394 | 33869.1 |
| amidase | APR52_17720 | P59385 | Positive | 3826424 - 3827824 | 49309.1 |
| glutamate-1-semialdehyde aminotransferase | APR52_17725 | Q21YQ0 | Negative | 3827834 - 3829120 | 45347.6 |
| phosphomethylpyrimidine kinase | APR52_17730 | Not Available | Negative | 3829141 - 3830106 | 34342.0 |
| two-component system response regulator | APR52_17735 | P46384 | Positive | 3830470 - 3830868 | 14681.7 |
| two-component system response regulator | APR52_17740 | P43501 | Positive | 3830869 - 3831234 | 13642.6 |
| chemotaxis protein chew | APR52_17745 | Not Available | Positive | 3831254 - 3831787 | 18619.1 |
| chemotaxis protein | APR52_17750 | P42257 | Positive | 3831834 - 3834161 | 81829.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
