Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | APR52_17655 | Q9I2F8 | Negative | 3814140 - 3815096 | 33360.6 |
| gtp-binding protein | APR52_17660 | P0ABU3 | Positive | 3815306 - 3816397 | 39460.3 |
| hypothetical protein | APR52_17665 | Not Available | Positive | 3816903 - 3817736 | 30480.9 |
| hypothetical protein | APR52_17670 | Not Available | Positive | 3817754 - 3818182 | 15830.1 |
| peptidase s1 | APR52_17675 | O22609 | Negative | 3818185 - 3819147 | 33694.4 |
| glutathione s-transferase | APR52_17680 | Q9P6M1 | Positive | 3819332 - 3820006 | 24870.3 |
| hypothetical protein | APR52_17685 | P0ADR0 | Negative | 3820016 - 3820486 | 17155.5 |
| trna-dihydrouridine synthase b | APR52_17690 | Q88DK5 | Positive | 3820681 - 3821739 | 38496.1 |
| fis family transcriptional regulator | APR52_17695 | P64130 | Positive | 3821757 - 3821993 | 9102.19 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | APR52_17700 | C5CL84 | Positive | 3822020 - 3823627 | 56836.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
