Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_17605 | Not Available | Positive | 3803626 - 3804237 | 21860.5 |
| peptidase m61 | APR52_17610 | Not Available | Negative | 3804234 - 3806108 | 67749.7 |
| disulfide isomerase | APR52_17615 | Q7WEL4 | Negative | 3806108 - 3806842 | 27031.4 |
| ubiquinone biosynthesis protein ubih | APR52_17620 | P25535 | Negative | 3806878 - 3808023 | 41224.5 |
| fe-s protein | APR52_17625 | Q969Z3 | Positive | 3808129 - 3809016 | 32724.2 |
| ribose pyranase | APR52_17630 | C5CL95 | Negative | 3809021 - 3809419 | 14146.3 |
| ribokinase | APR52_17635 | P44331 | Negative | 3809416 - 3810312 | 30707.8 |
| laci family transcriptional regulator | APR52_17640 | Q6LQB9 | Negative | 3810372 - 3811451 | 38506.2 |
| abc transporter permease | APR52_17645 | Not Available | Negative | 3811500 - 3812492 | 33412.8 |
| sugar abc transporter atp-binding protein | APR52_17650 | Q7NTN6 | Negative | 3812513 - 3814081 | 56207.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
