Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_17555 | Not Available | Positive | 3789763 - 3790056 | 10356.7 |
| hypothetical protein | APR52_17560 | P75919 | Negative | 3790191 - 3791585 | 50686.2 |
| mercury transport protein merc | APR52_17565 | Q50919 | Negative | 3792894 - 3793316 | 14847.4 |
| hypothetical protein | APR52_17570 | Not Available | Negative | 3794046 - 3795230 | 44149.5 |
| hypothetical protein | APR52_17575 | Not Available | Negative | 3795242 - 3796378 | 42407.7 |
| Trna-met | Not Available | Not Available | Positive | 3799078 - 3799154 | Not Available |
| hypothetical protein | APR52_17585 | Not Available | Negative | 3799190 - 3800653 | 52159.7 |
| rna polymerase subunit sigma-24 | APR52_17590 | Not Available | Positive | 3800842 - 3801528 | 25012.6 |
| hypothetical protein | APR52_17595 | Not Available | Positive | 3802197 - 3802637 | 14973.7 |
| enoyl-coa hydratase | APR52_17600 | Not Available | Negative | 3802689 - 3803468 | 27728.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
