Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_17455 | Not Available | Negative | 3765890 - 3766306 | 14907.8 |
| hypothetical protein | APR52_17460 | Not Available | Negative | 3766365 - 3767189 | 31231.1 |
| hypothetical protein | APR52_17465 | Not Available | Negative | 3767226 - 3767507 | 9890.04 |
| hypothetical protein | APR52_17470 | Not Available | Negative | 3767676 - 3768167 | 17302.7 |
| copper oxidase | APR52_17475 | Not Available | Negative | 3768214 - 3769629 | 52047.8 |
| transporter | APR52_17480 | Not Available | Negative | 3769666 - 3771090 | 51294.8 |
| hypothetical protein | APR52_17485 | Not Available | Negative | 3771578 - 3772012 | 15117.1 |
| two-component system response regulator | APR52_17490 | Not Available | Positive | 3772657 - 3773340 | 25396.9 |
| histidine kinase | APR52_17495 | Not Available | Positive | 3773394 - 3774758 | 49493.1 |
| type ii restriction endonuclease | APR52_17500 | Not Available | Positive | 3774945 - 3776207 | 46193.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
