Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | APR52_17405 | Not Available | Negative | 3754662 - 3755351 | 24983.1 |
| glutamate abc transporter permease | APR52_17410 | Not Available | Negative | 3755351 - 3756088 | 27145.9 |
| amino acid transporter | APR52_17415 | Not Available | Negative | 3756146 - 3757072 | 33823.1 |
| cystathionine beta-lyase | APR52_17420 | Q52811 | Negative | 3757094 - 3758251 | 41701.4 |
| hypothetical protein | APR52_17425 | Not Available | Negative | 3758297 - 3758725 | 15424.6 |
| lysr family transcriptional regulator | APR52_17430 | Not Available | Positive | 3758846 - 3759784 | 34337.3 |
| copper-transporting atpase | APR52_17435 | Not Available | Negative | 3759871 - 3762210 | 82207.1 |
| copper-binding protein | APR52_17440 | Not Available | Negative | 3762420 - 3762611 | 6673.91 |
| copper oxidase | APR52_17445 | Not Available | Negative | 3762712 - 3764727 | 73552.4 |
| cytochrome c | APR52_17450 | Not Available | Negative | 3765171 - 3765827 | 23000.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
