Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_01070 | Not Available | Negative | 228839 - 230746 | 66306.7 |
| luxr family transcriptional regulator | APR52_01075 | Not Available | Negative | 231070 - 232545 | 52155.1 |
| hypothetical protein | APR52_01080 | Not Available | Positive | 232682 - 233227 | 19567.2 |
| hypothetical protein | APR52_01085 | Not Available | Negative | 233284 - 233610 | 11639.3 |
| hypothetical protein | APR52_01090 | Not Available | Negative | 233607 - 233942 | 12455.3 |
| cupin | APR52_01095 | Not Available | Negative | 234024 - 234512 | 16768.2 |
| dtdp-glucose 4,6-dehydratase | APR52_01100 | Not Available | Negative | 234557 - 235300 | 25782.9 |
| hypothetical protein | APR52_01105 | D5AKX9 | Negative | 235421 - 236824 | 49138.8 |
| flavin reductase domain-containing protein | APR52_01110 | O67071 | Positive | 236954 - 237580 | 22903.5 |
| hypothetical protein | APR52_01115 | Not Available | Positive | 237680 - 238771 | 38629.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
