Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_17305 | Not Available | Positive | 3734350 - 3734814 | 16226.7 |
| transporter | APR52_17310 | Not Available | Positive | 3734951 - 3736264 | 48142.0 |
| secretion protein hlyd | APR52_17315 | Q8XEH9 | Positive | 3736285 - 3737961 | 58242.2 |
| cation transporter | APR52_17320 | Not Available | Positive | 3737958 - 3741128 | 115705.0 |
| hypothetical protein | APR52_17325 | Not Available | Positive | 3741951 - 3742247 | 10229.2 |
| hypothetical protein | APR52_17330 | Not Available | Positive | 3742364 - 3742819 | 15905.6 |
| transposase | APR52_17335 | Q04222 | Negative | 3743128 - 3746070 | 109704.0 |
| hypothetical protein | APR52_17340 | P31125 | Negative | 3746101 - 3746652 | 19740.9 |
| arsr family transcriptional regulator | APR52_17345 | Not Available | Positive | 3746729 - 3747055 | 11612.9 |
| hypothetical protein | APR52_17350 | Not Available | Negative | 3747125 - 3747352 | 8114.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
