Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redoxin | APR52_17245 | Q8CXF3 | Positive | 3717112 - 3717612 | 18006.8 |
| protein-disulfide reductase | APR52_17260 | Not Available | Negative | 3722775 - 3724817 | 72394.7 |
| signal peptidase ii | APR52_17265 | B2T6I8 | Negative | 3726024 - 3726500 | 17645.3 |
| pa-phosphatase | APR52_17270 | Not Available | Negative | 3726577 - 3727191 | 21979.0 |
| atpase p | APR52_17275 | P37386 | Negative | 3727197 - 3730109 | 103104.0 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | APR52_17280 | P45277 | Positive | 3730202 - 3730600 | 15337.5 |
| hypothetical protein | APR52_17285 | Not Available | Negative | 3730613 - 3730909 | 10544.9 |
| cation transporter | APR52_17290 | Not Available | Positive | 3730908 - 3731531 | 21596.5 |
| iron permease | APR52_17295 | Q8XAS8 | Negative | 3731562 - 3733493 | 67465.6 |
| merr family transcriptional regulator | APR52_17300 | Not Available | Positive | 3733847 - 3734353 | 18133.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
