Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein | APR52_17195 | Q9KDL8 | Negative | 3708695 - 3709429 | 25161.5 |
| redoxin | APR52_17200 | P43221 | Negative | 3709429 - 3709977 | 19277.8 |
| photosynthetic protein synthase i | APR52_17205 | Q9ZCW7 | Negative | 3710037 - 3710588 | 20130.0 |
| signal peptidase ii | APR52_17210 | A2SKB1 | Negative | 3710709 - 3711200 | 17523.2 |
| cytochrome c assembly protein | APR52_17215 | Q31QX6 | Negative | 3711304 - 3712626 | 49270.4 |
| cation transporter | APR52_17220 | Not Available | Negative | 3712623 - 3713249 | 21865.9 |
| disulfide bond formation protein dsba | APR52_17225 | Q7WDP8 | Negative | 3713276 - 3713911 | 23389.2 |
| dihydrolipoamide dehydrogenase | APR52_17230 | Not Available | Positive | 3714136 - 3715581 | 50790.4 |
| hypothetical protein | APR52_17235 | Not Available | Positive | 3715906 - 3716136 | 7953.32 |
| hypothetical protein | APR52_17240 | Not Available | Positive | 3716321 - 3716770 | 16137.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
