Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | APR52_17040 | C5CKF2 | Positive | 3672418 - 3672795 | 12714.3 |
| dna-directed rna polymerase subunit beta | APR52_17045 | B9MH47 | Positive | 3673097 - 3677221 | 152744.0 |
| dna-directed rna polymerase subunit beta' | APR52_17050 | C5CKF4 | Positive | 3677241 - 3681470 | 154657.0 |
| lema family protein | APR52_17055 | Not Available | Positive | 3681607 - 3682227 | 21395.7 |
| 16s rrna methyltransferase | APR52_17060 | Q9I7A9 | Positive | 3682344 - 3683669 | 48106.6 |
| hypothetical protein | APR52_17065 | Not Available | Positive | 3683650 - 3684288 | 24000.0 |
| histidine kinase | APR52_17070 | Q04850 | Positive | 3684285 - 3686600 | 82856.4 |
| xre family transcriptional regulator | APR52_17075 | Q1RJS1 | Positive | 3686673 - 3687374 | 25388.5 |
| Trna-phe | Not Available | Not Available | Positive | 3687458 - 3687533 | Not Available |
| hypothetical protein | APR52_17085 | B7UP20 | Positive | 3688200 - 3688853 | 25314.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
