Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | APR52_16990 | Q54SS0 | Negative | 3665449 - 3666255 | 29114.0 |
| abc transporter permease | APR52_16995 | Not Available | Negative | 3666359 - 3667336 | 34498.6 |
| abc transporter permease | APR52_17000 | Not Available | Negative | 3667347 - 3668234 | 31305.7 |
| abc transporter atp-binding protein | APR52_17005 | Not Available | Negative | 3668239 - 3668946 | 25497.4 |
| Trna-trp | Not Available | Not Available | Positive | 3669064 - 3669139 | Not Available |
| preprotein translocase subunit sece | APR52_17015 | Not Available | Positive | 3669275 - 3669658 | 14020.2 |
| antitermination protein nusg | APR52_17020 | P65591 | Positive | 3669773 - 3670267 | 18799.6 |
| 50s ribosomal protein l11 | APR52_17025 | C5CKE9 | Positive | 3670405 - 3670836 | 15103.7 |
| 50s ribosomal protein l1 | APR52_17030 | C5CKF0 | Positive | 3670837 - 3671535 | 23937.3 |
| 50s ribosomal protein l10 | APR52_17035 | C5CKF1 | Positive | 3671834 - 3672367 | 18326.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
