Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose abc transporter permease | APR52_16890 | Not Available | Positive | 3644954 - 3646561 | 57012.7 |
| nitroreductase | APR52_16895 | Not Available | Negative | 3646577 - 3647278 | 25173.6 |
| ring-hydroxylating oxygenase subunit alpha | APR52_16900 | Not Available | Positive | 3647531 - 3648850 | 49898.1 |
| ferredoxin | APR52_16905 | Not Available | Positive | 3648847 - 3649818 | 34725.4 |
| hypothetical protein | APR52_16910 | Not Available | Positive | 3649835 - 3650584 | 27341.8 |
| hypothetical protein | APR52_16915 | Not Available | Positive | 3650616 - 3651596 | 34296.4 |
| carnitine dehydratase | APR52_16920 | Not Available | Positive | 3651608 - 3652900 | 46700.5 |
| acetyl-coa acetyltransferase | APR52_16925 | Not Available | Positive | 3652897 - 3654078 | 41169.0 |
| dna-binding protein | APR52_16930 | Not Available | Positive | 3654129 - 3654530 | 15073.0 |
| hypothetical protein | APR52_16935 | Q4WR24 | Positive | 3654487 - 3656271 | 62479.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
