Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | APR52_16840 | Not Available | Positive | 3632993 - 3634102 | 41083.1 |
| hypothetical protein | APR52_16845 | Not Available | Negative | 3634250 - 3635206 | 33559.6 |
| carnitine dehydratase | APR52_16850 | A9WGE3 | Negative | 3635317 - 3636486 | 42403.8 |
| coa transferase | APR52_16855 | Q59111 | Negative | 3636521 - 3637417 | 32033.3 |
| 3-oxoadipate coa-transferase | APR52_16860 | Q8VPF2 | Negative | 3637429 - 3638226 | 29179.2 |
| gntr family transcriptional regulator | APR52_16865 | D2TP58 | Negative | 3638390 - 3639268 | 31332.6 |
| acyl-coa dehydrogenase | APR52_16870 | I6YCA3 | Positive | 3639435 - 3641684 | 80920.6 |
| hypothetical protein | APR52_16875 | P44487 | Negative | 3641707 - 3642435 | 26853.8 |
| hypothetical protein | APR52_16880 | Not Available | Positive | 3642590 - 3643573 | 33910.4 |
| hypothetical protein | APR52_16885 | Not Available | Positive | 3643619 - 3644794 | 43711.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
