Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | APR52_01020 | Not Available | Negative | 217226 - 218584 | 48211.0 |
| hypothetical protein | APR52_01025 | Q88JX7 | Negative | 218663 - 219571 | 33035.0 |
| hypothetical protein | APR52_01030 | Not Available | Negative | 219629 - 220582 | 34906.7 |
| hypothetical protein | APR52_01035 | O34893 | Positive | 220757 - 221509 | 25938.3 |
| acyl-coa dehydrogenase | APR52_01040 | P71858 | Positive | 221514 - 222650 | 41265.0 |
| hypothetical protein | APR52_01045 | Not Available | Positive | 222647 - 223687 | 37002.3 |
| hypothetical protein | APR52_01050 | Not Available | Positive | 223723 - 224727 | 35090.9 |
| acetyl-coa acetyltransferase | APR52_01055 | Not Available | Positive | 224724 - 225926 | 42931.0 |
| histidine kinase | APR52_01060 | Q9HWR3 | Positive | 226222 - 227436 | 43365.9 |
| luxr family transcriptional regulator | APR52_01065 | Not Available | Negative | 227541 - 228635 | 39802.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
