Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acetyltransferase | APR52_16790 | D1AB74 | Positive | 3622544 - 3623713 | 40156.1 |
| dna-binding protein | APR52_16795 | Not Available | Positive | 3623716 - 3624114 | 14218.0 |
| hypothetical protein | APR52_16800 | Not Available | Negative | 3624124 - 3625092 | 34314.5 |
| hypothetical protein | APR52_16805 | Not Available | Negative | 3625092 - 3626501 | 49211.2 |
| acyl-coa synthetase | APR52_16810 | Not Available | Negative | 3626544 - 3626864 | 12071.4 |
| 3-methylaspartate ammonia-lyase | APR52_16815 | Not Available | Negative | 3626861 - 3628234 | 48714.1 |
| monooxygenase | APR52_16820 | Q0ZIH7 | Negative | 3628231 - 3629586 | 50578.8 |
| hypothetical protein | APR52_16825 | Not Available | Negative | 3629640 - 3630599 | 33218.1 |
| hypothetical protein | APR52_16830 | P71318 | Positive | 3630763 - 3631704 | 33952.6 |
| flavin reductase | APR52_16835 | P54990 | Positive | 3631826 - 3632902 | 38357.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
