Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_16740 | Not Available | Positive | 3612391 - 3613374 | 35514.6 |
| hypothetical protein | APR52_16745 | Not Available | Positive | 3613392 - 3613760 | 13218.9 |
| acyl-coa dehydrogenase | APR52_16750 | P63428 | Positive | 3613757 - 3614896 | 41707.4 |
| hypothetical protein | APR52_16755 | P45857 | Negative | 3614934 - 3616070 | 41546.0 |
| hypothetical protein | APR52_16760 | A6QQF5 | Negative | 3616099 - 3617106 | 34700.9 |
| 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-coa hydratase | APR52_16765 | I6YBZ8 | Negative | 3617103 - 3617969 | 31456.7 |
| enoyl-coa hydratase | APR52_16770 | Not Available | Negative | 3618017 - 3618808 | 27933.0 |
| hypothetical protein | APR52_16775 | Not Available | Negative | 3618805 - 3619842 | 38876.0 |
| 3-oxoacyl-acp reductase | APR52_16780 | Not Available | Negative | 3619857 - 3620630 | 27035.7 |
| long-chain fatty acid--coa ligase | APR52_16785 | Not Available | Negative | 3620689 - 3622353 | 60634.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
