Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-methanol-choline oxidoreductase | APR52_16590 | Q8D3K2 | Positive | 3580437 - 3582056 | 58216.6 |
| arylsulfatase | APR52_16595 | P51691 | Positive | 3582083 - 3584362 | 83758.7 |
| hypothetical protein | APR52_16600 | Not Available | Positive | 3584389 - 3585390 | 34593.0 |
| hypothetical protein | APR52_16605 | Not Available | Positive | 3585449 - 3586510 | 36541.5 |
| hypothetical protein | APR52_16610 | Not Available | Negative | 3586529 - 3588574 | 66825.4 |
| hypothetical protein | APR52_16615 | Not Available | Negative | 3588884 - 3589831 | 35122.1 |
| hypothetical protein | APR52_16620 | A0A0H3CC47 | Negative | 3590029 - 3590670 | 22085.9 |
| rna polymerase subunit sigma | APR52_16625 | Not Available | Negative | 3590667 - 3591227 | 20881.1 |
| hypothetical protein | APR52_16630 | Not Available | Negative | 3591367 - 3591549 | 6518.43 |
| hypothetical protein | APR52_16635 | Not Available | Negative | 3591609 - 3591791 | 6822.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
