Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter mfp subunit | APR52_16540 | Q8CWA2 | Positive | 3570471 - 3571976 | 52806.6 |
| cation transporter | APR52_16545 | Not Available | Positive | 3571973 - 3575134 | 113362.0 |
| hypothetical protein | APR52_16550 | Not Available | Positive | 3575164 - 3575460 | 10306.7 |
| hypothetical protein | APR52_16555 | Not Available | Negative | 3575478 - 3576743 | 44096.0 |
| hypothetical protein | APR52_16560 | Not Available | Negative | 3576873 - 3577514 | 22003.0 |
| hypothetical protein | APR52_16565 | Not Available | Positive | 3577719 - 3577928 | 7078.09 |
| rna polymerase subunit sigma-24 | APR52_16570 | A0R2D4 | Positive | 3577931 - 3578458 | 19674.0 |
| hypothetical protein | APR52_16575 | Not Available | Negative | 3578512 - 3579189 | 23902.4 |
| thiamine pyrophosphate-binding protein | APR52_16580 | Not Available | Positive | 3579285 - 3579818 | 19183.2 |
| hypothetical protein | APR52_16585 | O27275 | Positive | 3579829 - 3580425 | 20987.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
