Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_16440 | P0AEQ5 | Positive | 3553617 - 3554492 | 31409.7 |
| polar amino acid abc transporter permease | APR52_16445 | Not Available | Positive | 3554508 - 3555647 | 41048.2 |
| peptide abc transporter atp-binding protein | APR52_16450 | Not Available | Positive | 3555663 - 3556406 | 27440.4 |
| histidine utilization repressor | APR52_16455 | P22773 | Positive | 3556470 - 3557189 | 26818.5 |
| arac family transcriptional regulator | APR52_16460 | Not Available | Positive | 3557213 - 3557983 | 29057.8 |
| nadph quinone oxidoreductase | APR52_16465 | Q5RBB9 | Positive | 3558017 - 3558799 | 28819.1 |
| fad-dependent oxidoreductase | APR52_16470 | Not Available | Positive | 3558822 - 3559997 | 42127.3 |
| dehydrogenase | APR52_16475 | P39483 | Positive | 3560011 - 3560784 | 26445.0 |
| glyoxalase | APR52_16480 | Not Available | Positive | 3560788 - 3561240 | 16534.7 |
| hypothetical protein | APR52_16485 | Q5FUE6 | Positive | 3561257 - 3562015 | 26463.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
