Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropyrimidinase | APR52_16390 | Q8VTT5 | Negative | 3543573 - 3545084 | 54307.9 |
| n-carbamoyl-d-amino acid hydrolase | APR52_16395 | Q44185 | Negative | 3545105 - 3546040 | 34981.1 |
| polar amino acid abc transporter permease | APR52_16400 | Not Available | Negative | 3546086 - 3546772 | 25106.8 |
| polar amino acid abc transporter permease | APR52_16405 | O34671 | Negative | 3546794 - 3547474 | 24137.2 |
| ectoine/hydroxyectoine abc transporter atp-binding protein ehua | APR52_16410 | Not Available | Negative | 3547496 - 3548245 | 26781.7 |
| polar amino acid abc transporter substrate-binding protein | APR52_16415 | Not Available | Negative | 3548298 - 3549140 | 29905.8 |
| lysr family transcriptional regulator | APR52_16420 | Not Available | Negative | 3549398 - 3550312 | 33795.1 |
| gntr family transcriptional regulator | APR52_16425 | O05494 | Negative | 3550367 - 3551008 | 23678.7 |
| hypothetical protein | APR52_16430 | Not Available | Positive | 3551390 - 3552457 | 39541.2 |
| hypothetical protein | APR52_16435 | Not Available | Positive | 3552574 - 3553545 | 34529.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
