Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_16340 | Q8UGX7 | Negative | 3534147 - 3534659 | 18604.8 |
| hypothetical protein | APR52_16345 | Not Available | Negative | 3534832 - 3535656 | 29765.4 |
| rna polymerase subunit sigma | APR52_16350 | Not Available | Negative | 3535653 - 3536216 | 21389.0 |
| hypothetical protein | APR52_16355 | Not Available | Negative | 3536257 - 3537744 | 51832.7 |
| hypothetical protein | APR52_16360 | Not Available | Negative | 3537784 - 3538119 | 12096.6 |
| lysr family transcriptional regulator | APR52_16365 | Not Available | Negative | 3538310 - 3539263 | 34070.4 |
| hypothetical protein | APR52_16370 | Q9HTI1 | Positive | 3539490 - 3540473 | 33704.2 |
| benzaldehyde dehydrogenase | APR52_16375 | K9UV87 | Negative | 3540504 - 3541982 | 51325.2 |
| glutamate racemase | APR52_16380 | H8L901 | Negative | 3542159 - 3542881 | 25099.7 |
| hypothetical protein | APR52_16385 | Q9F466 | Negative | 3542881 - 3543576 | 23920.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
