Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_00970 | Q8GP19 | Negative | 205746 - 207059 | 46971.4 |
| two-component system response regulator | APR52_00975 | Not Available | Negative | 207056 - 207745 | 24887.1 |
| gcn5 family acetyltransferase | APR52_00980 | Not Available | Positive | 207937 - 208377 | 16198.5 |
| amino acid abc transporter substrate-binding protein | APR52_00985 | Not Available | Negative | 208586 - 209665 | 38264.2 |
| transporter | APR52_00990 | P96668 | Negative | 209673 - 210548 | 30383.2 |
| gntr family transcriptional regulator | APR52_00995 | Not Available | Positive | 210657 - 212099 | 51874.8 |
| dna polymerase ii | APR52_01000 | P21189 | Positive | 212141 - 214522 | 89792.3 |
| enoyl-coa hydratase | APR52_01005 | Not Available | Negative | 214525 - 215340 | 29393.2 |
| hypothetical protein | APR52_01010 | Not Available | Positive | 215410 - 216117 | 25351.7 |
| hypothetical protein | APR52_01015 | Not Available | Negative | 216141 - 217229 | 39172.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
