Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | APR52_16230 | Not Available | Negative | 3512456 - 3513496 | 36642.1 |
| transporter | APR52_16235 | Not Available | Negative | 3513579 - 3514688 | 37964.7 |
| thiosulfohydrolase soxb | APR52_16240 | A9BJC1 | Negative | 3514739 - 3516466 | 62272.0 |
| sulfur oxidation c-type cytochrome soxx | APR52_16245 | Not Available | Negative | 3516489 - 3517154 | 23592.7 |
| sulfur oxidation c-type cytochrome soxa | APR52_16250 | Q08IS0 | Negative | 3517166 - 3517969 | 28979.8 |
| thiosulfate oxidation carrier complex protein soxz | APR52_16255 | Not Available | Negative | 3517979 - 3518278 | 10794.9 |
| thiosulfate oxidation carrier protein soxy | APR52_16260 | Not Available | Negative | 3518339 - 3518794 | 15537.8 |
| cytochrome c | APR52_16265 | P15452 | Negative | 3518844 - 3519902 | 36970.2 |
| sulfite dehydrogenase | APR52_16270 | P07850 | Negative | 3519886 - 3521229 | 48764.2 |
| hypothetical protein | APR52_16275 | Not Available | Negative | 3521249 - 3521560 | 10439.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
