Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | APR52_16130 | P35159 | Negative | 3487869 - 3488669 | 29841.4 |
| cytidyltransferase | APR52_16135 | Q55928 | Positive | 3488876 - 3489949 | 40158.6 |
| nicotinate phosphoribosyltransferase | APR52_16140 | P43490 | Positive | 3490022 - 3491467 | 52692.7 |
| galactosyldiacylglycerol synthase | APR52_16145 | Q5HQE7 | Positive | 3491798 - 3492946 | 41316.5 |
| hypothetical protein | APR52_16150 | Not Available | Positive | 3492943 - 3493434 | 19150.2 |
| protein tyrosine phosphatase | APR52_16155 | Not Available | Positive | 3493458 - 3494033 | 21337.7 |
| nadh oxidase | APR52_16160 | Not Available | Positive | 3494146 - 3495276 | 39637.8 |
| elongation factor g | APR52_16165 | A5FV42 | Negative | 3495324 - 3497342 | 73189.1 |
| two-component system response regulator | APR52_16170 | P21866 | Negative | 3498003 - 3498695 | 25373.4 |
| sensor protein kdpd | APR52_16175 | P21865 | Negative | 3498701 - 3501439 | 96907.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
