Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-shock protein hsp90 | APR52_16080 | A1W3A1 | Negative | 3477239 - 3479275 | 74637.1 |
| iron abc transporter substrate-binding protein | APR52_16085 | Not Available | Negative | 3479423 - 3480463 | 37646.8 |
| lysr family transcriptional regulator | APR52_16090 | Not Available | Negative | 3480518 - 3481426 | 32926.9 |
| alcohol dehydrogenase | APR52_16095 | Not Available | Positive | 3481525 - 3482532 | 34831.0 |
| porin | APR52_16100 | Q9HWZ3 | Positive | 3482716 - 3483459 | 24896.3 |
| hypothetical protein | APR52_16105 | Not Available | Negative | 3483542 - 3483883 | 11130.9 |
| hypothetical protein | APR52_16110 | Not Available | Negative | 3484082 - 3484414 | 11452.5 |
| histidine kinase | APR52_16115 | Q8X524 | Negative | 3484539 - 3485924 | 50337.6 |
| xre family transcriptional regulator | APR52_16120 | Q9HV32 | Negative | 3485921 - 3486577 | 24102.9 |
| hypothetical protein | APR52_16125 | Not Available | Negative | 3486772 - 3487902 | 41299.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
