Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna alkylation response protein | APR52_16030 | Not Available | Positive | 3465741 - 3467429 | 61553.2 |
| abc transporter substrate-binding protein | APR52_16035 | Not Available | Positive | 3467464 - 3468450 | 34055.2 |
| carnitine dehydratase | APR52_16040 | Q7CXU0 | Positive | 3468509 - 3469645 | 40051.9 |
| glycosyl transferase | APR52_16045 | Not Available | Positive | 3469683 - 3470741 | 38406.0 |
| hypothetical protein | APR52_16050 | Not Available | Positive | 3470753 - 3471739 | 35460.1 |
| hypothetical protein | APR52_16055 | Not Available | Positive | 3471729 - 3472487 | 27847.6 |
| hypothetical protein | APR52_16060 | Not Available | Positive | 3472502 - 3473629 | 40432.3 |
| hypothetical protein | APR52_16065 | Not Available | Negative | 3473626 - 3475311 | 60192.4 |
| abc transporter substrate-binding protein | APR52_16070 | Not Available | Negative | 3475499 - 3476491 | 34901.3 |
| hypothetical protein | APR52_16075 | Not Available | Negative | 3476550 - 3477242 | 21535.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
