Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyryl-coa dehydrogenase | APR52_15980 | P77851 | Positive | 3456804 - 3457652 | 29820.7 |
| enoyl-coa hydratase | APR52_15985 | Not Available | Positive | 3457684 - 3458499 | 29415.7 |
| 6-aminohexanoate hydrolase | APR52_15990 | P07062 | Positive | 3458539 - 3459876 | 48028.1 |
| marr family transcriptional regulator | APR52_15995 | O34777 | Positive | 3459972 - 3460421 | 16631.4 |
| peroxiredoxin | APR52_16000 | Not Available | Positive | 3460531 - 3460956 | 14272.0 |
| hypothetical protein | APR52_16005 | Not Available | Positive | 3461144 - 3462262 | 40528.6 |
| serine/threonine protein kinase | APR52_16010 | P0C0K4 | Positive | 3462298 - 3463347 | 38912.9 |
| hypothetical protein | APR52_16015 | Not Available | Negative | 3463338 - 3463733 | 14730.7 |
| hypothetical protein | APR52_16020 | Not Available | Negative | 3463789 - 3464502 | 26183.9 |
| lysr family transcriptional regulator | APR52_16025 | Not Available | Negative | 3464754 - 3465650 | 33117.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
