Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_15930 | Q9P016 | Negative | 3446071 - 3446532 | 17103.6 |
| abc transporter substrate-binding protein | APR52_15935 | Q1MDE9 | Negative | 3446597 - 3447757 | 42460.1 |
| fatty-acid--coa ligase | APR52_15940 | P44446 | Negative | 3447819 - 3449702 | 69577.0 |
| abc transporter atp-binding protein | APR52_15945 | Not Available | Negative | 3449708 - 3450481 | 28590.7 |
| abc transporter atp-binding protein | APR52_15950 | Not Available | Negative | 3450478 - 3451299 | 29942.1 |
| abc transporter permease | APR52_15955 | Not Available | Negative | 3451296 - 3452372 | 38675.1 |
| abc transporter permease | APR52_15960 | Not Available | Negative | 3452375 - 3453250 | 30721.3 |
| arac family transcriptional regulator | APR52_15965 | Not Available | Negative | 3453270 - 3454145 | 31943.3 |
| acetyl hydrolase | APR52_15970 | P95125 | Negative | 3454279 - 3455232 | 33996.5 |
| phosphoribosylglycinamide formyltransferase | APR52_15975 | C5CP83 | Negative | 3455423 - 3456625 | 42594.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
