Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine gamma-lyase | APR52_00920 | P13254 | Positive | 194713 - 195912 | 43004.0 |
| 2-dehydro-3-deoxygluconokinase | APR52_00925 | Q53W83 | Negative | 195919 - 196863 | 32625.8 |
| dimethylmenaquinone methyltransferase | APR52_00930 | Q9AQI0 | Negative | 196850 - 197500 | 22906.6 |
| abc transporter substrate-binding protein | APR52_00935 | P44992 | Negative | 197615 - 198598 | 35690.0 |
| l-dehydroascorbate transporter large permease subunit | APR52_00940 | Not Available | Negative | 198638 - 199915 | 44843.5 |
| hypothetical protein | APR52_00945 | Not Available | Negative | 199938 - 200456 | 18919.4 |
| hypothetical protein | APR52_00950 | P32425 | Positive | 200559 - 201272 | 26186.5 |
| sugar abc transporter substrate-binding protein | APR52_00955 | Q2K8C8 | Negative | 201269 - 202318 | 37238.2 |
| iron abc transporter permease | APR52_00960 | Q44123 | Negative | 202341 - 204578 | 78605.2 |
| iron abc transporter substrate-binding protein | APR52_00965 | P43951 | Negative | 204589 - 205587 | 36160.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
