Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_15730 | Not Available | Positive | 3406493 - 3407185 | 21535.1 |
| abc transporter substrate-binding protein | APR52_15735 | Not Available | Positive | 3407244 - 3408236 | 34901.3 |
| hypothetical protein | APR52_15740 | Not Available | Positive | 3408424 - 3410109 | 60192.4 |
| hypothetical protein | APR52_15745 | Not Available | Negative | 3410106 - 3411233 | 40432.3 |
| hypothetical protein | APR52_15750 | Not Available | Negative | 3411248 - 3412006 | 27847.6 |
| hypothetical protein | APR52_15755 | Not Available | Negative | 3411996 - 3412982 | 35460.1 |
| glycosyl transferase | APR52_15760 | Not Available | Negative | 3412994 - 3414052 | 38406.0 |
| carnitine dehydratase | APR52_15765 | Not Available | Negative | 3414090 - 3415226 | 40051.9 |
| abc transporter substrate-binding protein | APR52_15770 | Not Available | Negative | 3415285 - 3416271 | 34055.2 |
| dna alkylation response protein | APR52_15775 | Not Available | Negative | 3416306 - 3417994 | 61553.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
