Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_15680 | Not Available | Positive | 3395833 - 3396963 | 41299.8 |
| xre family transcriptional regulator | APR52_15685 | Not Available | Positive | 3397158 - 3397814 | 24102.9 |
| histidine kinase | APR52_15690 | Not Available | Positive | 3397811 - 3399196 | 50337.6 |
| hypothetical protein | APR52_15695 | Not Available | Positive | 3399321 - 3399653 | 11452.5 |
| hypothetical protein | APR52_15700 | Not Available | Positive | 3399852 - 3400193 | 11130.9 |
| porin | APR52_15705 | Not Available | Negative | 3400276 - 3401019 | 24896.3 |
| alcohol dehydrogenase | APR52_15710 | Not Available | Negative | 3401203 - 3402210 | 34831.0 |
| lysr family transcriptional regulator | APR52_15715 | Not Available | Positive | 3402309 - 3403217 | 32926.9 |
| iron abc transporter substrate-binding protein | APR52_15720 | Not Available | Positive | 3403272 - 3404312 | 37646.8 |
| heat-shock protein hsp90 | APR52_15725 | Not Available | Positive | 3404460 - 3406496 | 74637.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
