Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:proton antiporter | APR52_15625 | Q9Z3Q3 | Negative | 3385281 - 3385664 | 13594.8 |
| cation:proton antiporter | APR52_15630 | Q52983 | Negative | 3385661 - 3385939 | 10059.0 |
| cation:proton antiporter | APR52_15635 | Not Available | Negative | 3385936 - 3386427 | 18110.7 |
| cation:proton antiporter | APR52_15640 | Q52981 | Negative | 3386424 - 3388136 | 59672.0 |
| cation:proton antiporter | APR52_15645 | Q52980 | Negative | 3388133 - 3388495 | 12891.0 |
| cation:proton antiporter | APR52_15650 | Q52978 | Negative | 3388495 - 3391455 | 106319.0 |
| protein crcb | APR52_15655 | C5CTD2 | Negative | 3391535 - 3391912 | 12834.2 |
| nicotinate phosphoribosyltransferase | APR52_15665 | Not Available | Negative | 3392268 - 3393713 | 52692.7 |
| cytidyltransferase | APR52_15670 | Not Available | Negative | 3393786 - 3394859 | 40158.6 |
| rna-binding protein | APR52_15675 | Not Available | Positive | 3395066 - 3395866 | 29841.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
