Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_15575 | Not Available | Positive | 3375786 - 3376988 | 44181.6 |
| carbon monoxide dehydrogenase | APR52_15580 | Not Available | Positive | 3377034 - 3377699 | 22472.6 |
| cytochrome oxidase i | APR52_15585 | Not Available | Positive | 3377739 - 3378755 | 36690.2 |
| abc transporter atp-binding protein | APR52_15590 | Not Available | Negative | 3378766 - 3379554 | 28922.6 |
| dihydrodipicolinate synthetase | APR52_15595 | Not Available | Negative | 3379551 - 3380612 | 37919.5 |
| hypothetical protein | APR52_15600 | Not Available | Negative | 3380630 - 3381499 | 30298.6 |
| epimerase | APR52_15605 | Not Available | Negative | 3381511 - 3382563 | 38224.7 |
| nitrate abc transporter permease | APR52_15610 | Q57306 | Negative | 3382560 - 3383327 | 28005.6 |
| tetr family transcriptional regulator | APR52_15615 | Not Available | Negative | 3383477 - 3384160 | 24991.9 |
| nitrate abc transporter substrate-binding protein | APR52_15620 | Not Available | Positive | 3384266 - 3385258 | 35361.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
