Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR52_15525 | Not Available | Positive | 3364879 - 3365646 | 27670.7 |
| abc transporter atp-binding protein | APR52_15530 | Not Available | Positive | 3365643 - 3366356 | 25754.4 |
| allantoate amidohydrolase | APR52_15535 | Not Available | Positive | 3366384 - 3367637 | 44143.8 |
| microcystin degradation protein mlrc | APR52_15540 | Not Available | Positive | 3367634 - 3369109 | 51855.0 |
| polyketide cyclase | APR52_15545 | Not Available | Positive | 3369210 - 3369587 | 13298.6 |
| histidine kinase | APR52_15550 | Not Available | Negative | 3369589 - 3370734 | 40760.7 |
| carbon monoxide dehydrogenase | APR52_15555 | P19921 | Positive | 3370952 - 3371455 | 17387.1 |
| carbon monoxide dehydrogenase | APR52_15560 | P19913 | Positive | 3371466 - 3373853 | 85213.4 |
| carbon monoxide dehydrogenase | APR52_15565 | P19920 | Positive | 3373891 - 3374682 | 27435.1 |
| atpase | APR52_15570 | Not Available | Positive | 3374868 - 3375773 | 33492.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
